Upon receiving the intercepted dispatches which were brought to him by the soldier, Gonzalo Pizarro secretly communicated them to Captain Carvajal, whom he had recently appointed his lieutenant-general, or maestre de campo, in consequence of the sickness of Alfonzo de Toro, who held that commission on commencing the march from Cuzco. After consulting with Carvajal, he communicated the whole matter to the captains and those other chiefs of the insurgent-army who had shewn no intentions of abandoning him, as they had not participated in applying for the safe conduct from the viceroy. Some of these, from motives of enmity against individuals, others from envy, and others again from the hope of profiting by the forfeiture of the lands and Indians belonging to the accused, advised Gonzalo to punish these persons with rigor, as a warning to others not to venture upon similar conduct. In this secret consultation, it was determined to select the following from among those who were clearly implicated in taking part with the viceroy, by their names being contained in the safe conduct taken from Loyasa: Captain Gaspard Rodriguez; Philip Gutierrez, the son of Alfonso Gutierrez of Madrid who was treasurer to his majesty; and Arias Maldonado, a gentleman of Galicia, who had remained along with Gutierrez at Guamanga, two or three days march in the rear of the army, under pretence of having some preparations to make for the journey. Accordingly, Gonzalo sent off Pedro de Puelles to Guamanga accompanied by an escort of cavalry, who arrested these two latter gentlemen and caused them to be beheaded.

Gaspar Rodriguez was in the camp, where he commanded a body of near two hundred pikemen; and as Gonzalo and his advisers dared not to put him to death openly, as he was a very rich man of considerable influence and much beloved, they had to employ a stratagem for his arrestment. Gonzalo ordered a hundred and fifty musqueteers of the company commanded by Ceremeno to hold themselves in readiness around his tent, near which likewise he caused his train of artillery to be drawn up ready for service, and then convened all the captains belonging to his troops in his tent, under pretence of communicating some dispatches which he had received from Lima. When the whole were assembled, and Rodriguez among them, he became alarmed on seeing that the tent was surrounded by armed men and artillery, and wished to have retired under pretext of urgent business. At this time, and in presence of the whole assembled officers, the lieutenant-general Carvajal, came up to Rodriguez as if without any premeditated intention, caught hold of the guard of his sword, and drew it from the scabbard. Carvajal then desired him to make confession of his sins to a priest, who was in attendance for that express purpose, as he was to be immediately put to death. Rodriguez used every effort to avoid this sudden and unlooked for catastrophe, and offered to justify himself from every accusation which could be brought against him; but every thing he could allege was of no avail, as his death was resolved upon, and he was accordingly beheaded.

The execution of these three leaders astonished every one, being the first which were ventured upon since the usurpation of Gonzalo; but they more especially terrified those other persons who were conscious of having participated in the same plot for which their chiefs were now put to death. A few days afterwards, De Castro and his companions arrived at the camp of the insurgents, with their prisoners Loyasa and Zavallos. It has been reported that, on the very day of their arrival, Gonzalo sent off his lieutenant-general Carvajal to meet them on the road by which they were expected, with orders to have Loyasa and Zavallos strangled: But, fortunately for them, their conductors had left the ordinary road, taking a circuitous and unfrequented path, so that Carvajal did not fall in with them; and, when they were brought before Gonzalo, so many of his friends and accomplices interceded for their pardon, that he agreed to spare their lives. Loyasa was commanded immediately to quit the camp, on foot and without any provisions. Zavallos was detained in the camp as a prisoner; and, rather more than a year afterwards, was appointed superintendent of those who were employed in digging for gold in the province of Quito. While in that employment, it was represented to Gonzalo that Zavallos had become so exceedingly rich, that he must have purloined a great proportion of the gold which was drawn from the mines. Being predisposed against him by his former conduct in the service of the viceroy, Gonzalo was easily persuaded to believe him guilty, and ordered him to be hanged.

The departure of De Castro and his companions from Lima, as already mentioned, though conducted in great secrecy, was soon discovered. On the same night, as Diego de Urbina, the major general of the army belonging to the viceroy, was going the rounds of the city, he happened to visit the dwellings of several of those who had accompanied De Castro; and finding that they were absent, and that their horses, arms, servants, and Indians were all removed, he immediately suspected that they were gone off to join Gonzalo. Urbina went directly to the viceroy, who was already in bed, and assured him that most of the inhabitants had fled from the city, as he believed that the defection was more general than it turned out to be. The viceroy was very justly alarmed by this intelligence, and ordered the drums to beat to arms. When, in consequence of this measure, all the captains and other officers in his service were assembled, he gave them orders to visit the whole houses of the city, by which means it was soon known who had deserted. As Diego and Jerom de Carvajal, and Francisco Escovedo, nephews of the commissary Yllan Suarez de Carvajal were among the absentees, the viceroy immediately suspected Yllan Suarez of being a partisan of Gonzalo Pizarro, believing that his nephews had acted by his orders, more especially as they dwelt in his house, and could not therefore have gone away without his knowledge; though assuredly they might easily have escaped by a different door at a distance from the principal entrance. Actuated by these suspicions, the viceroy sent his brother, Vela Nunnez, with a detachment of musqueteers, to bring Suarez immediately to the palace for examination. On arriving at his house, Suarez was in bed, but was brought immediately before the viceroy, who was now dressed is his armour, and reposing on a couch. It is reported by some who were present, that the viceroy addressed Suarez on entering the following words. "Traitor! you have sent off your nephews to join Gonzalo Pizarro." "Call me not traitor, my lord," replied Suarez, "I am as faithful a subject to his majesty as you are." The viceroy was so much irritated by the insolent behaviour of Suarez, that he drew his sword and advanced towards him, and some even allege that he stabbed him in the breast. The viceroy, however, constantly asserted that he did not use his sword against Suarez; but that the servants and halberdiers who were in attendance, on noticing the insolent behaviour of the commissary to their master, had put him to death, without allowing him time for confession, or even for speaking a single word in his own defence. The body was immediately carried away for interment; and as the commissary was very universally beloved, it was thought dangerous to take his dead body through the great court of the viceregal palace, where there were always a hundred soldiers on guard during the night, lest it might occasion some disturbance. For this reason, it was let down from a gallery which overlooked the great square, whence some Indians and negroes carried it to a neighbouring church, and buried it without any ceremony in his ordinary scarlet cloak.

Three days after this tragical event, when the judges of the royal audience made the viceroy a prisoner, as shall be presently related, among their first transactions, they made a judicial examination respecting the circumstances attendant upon the death of Suarez. It was ascertained in the first place, that he had disappeared since the time when he was carried before the viceroy at midnight; after which, the body was dug up, and the wounds examined2. When the intelligence of the death of Suarez spread through Lima, it gave occasion to much dissatisfaction, as every one knew that he had been always, favourable to the interest and authority of the viceroy, and had even exerted his whole influence in procuring him to be received at Lima, in opposition to the sentiments of the majority of the magistrates of that city. His death happened on the night of Sunday the 13th of September 1544. Early next morning, Don Alfonzo de Montemayor was sent by the viceroy with a party of thirty horse, in pursuit of De Castro and the others who had gone after Loyasa and Zavallos. When Montemayor had travelled two or three days in the pursuit, he learnt that De Castro and his companions were already so far advanced in their journey that it would be utterly impossible to get up with them. He accordingly turned back, and receiving information on his return towards Lima, that Jerom de Carvajal had lost his companions during the night, and, being unable to discover the road by which they were gone, had concealed himself in a marsh among some tall reeds, where Montemayor found him out, and carried him prisoner to Lima, on purpose to give him up to the viceroy. Fortunately for Carvajal, the viceroy was himself a prisoner when Montemayor returned to Lima.